Index A | B | C | D | E | F | G | I | J | K | L | M | O | P | Q | R | S | T | U | V | W A application (bfabric.entities.Workunit attribute) Application (class in bfabric.entities) application_id (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) (bfabric.rest.token_data.TokenData attribute) application_name (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) application_parameters (bfabric.entities.Workunit property) as_uri() (bfabric.entities.core.uri.EntityUriComponents method) assert_success() (bfabric.results.result_container.ResultContainer method) auth (bfabric.Bfabric attribute) (bfabric.Bfabric property) B base_path (bfabric.entities.Storage property) Bfabric (class in bfabric) bfabric.entities module bfabric.entities.cache module bfabric_instance (bfabric.entities.core.entity.Entity property) BfabricConfigError (class in bfabric.errors) BfabricInstanceNotConfiguredError (class in bfabric.errors) BfabricRequestError (class in bfabric.errors) C caller (bfabric.rest.token_data.TokenData attribute) classname (bfabric.entities.core.entity.Entity property) client_entity (bfabric.entities.ExternalJob property) column_names (bfabric.entities.Dataset property) column_types (bfabric.entities.Dataset property) components (bfabric.entities.core.uri.EntityUri property) config (bfabric.Bfabric attribute) (bfabric.Bfabric property) config_data (bfabric.Bfabric attribute) (bfabric.Bfabric property) connect() (bfabric.Bfabric class method), [1] connect_token() (bfabric.Bfabric class method), [1] connect_token_async() (bfabric.Bfabric class method) connect_webapp() (bfabric.Bfabric class method), [1] container (bfabric.entities.Sample attribute) (bfabric.entities.Workflow attribute) (bfabric.entities.WorkflowStep attribute) (bfabric.entities.Workunit attribute) container_id (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) container_type (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) custom_attributes (bfabric.entities.core.entity.Entity property) D data_dict (bfabric.entities.core.entity.Entity property) dataset (bfabric.experimental.workunit_definition.WorkunitExecutionDefinition attribute) Dataset (class in bfabric.entities) decoded (bfabric.entities.Executable property) decoded_bytes (bfabric.entities.Executable property) decoded_str (bfabric.entities.Executable property) delete() (bfabric.Bfabric method), [1] dump_yaml() (bfabric.entities.core.entity.Entity method) E either_dataset_or_resources() (bfabric.experimental.workunit_definition.WorkunitExecutionDefinition method) ENDPOINT (bfabric.entities.Application attribute) (bfabric.entities.Dataset attribute) (bfabric.entities.Executable attribute) (bfabric.entities.ExternalJob attribute) (bfabric.entities.Instrument attribute) (bfabric.entities.MultiplexId attribute) (bfabric.entities.MultiplexKit attribute) (bfabric.entities.Order attribute) (bfabric.entities.Parameter attribute) (bfabric.entities.Plate attribute) (bfabric.entities.Project attribute) (bfabric.entities.Resource attribute) (bfabric.entities.Run attribute) (bfabric.entities.Sample attribute) (bfabric.entities.Storage attribute) (bfabric.entities.User attribute) (bfabric.entities.Workflow attribute) (bfabric.entities.WorkflowStep attribute) (bfabric.entities.WorkflowTemplate attribute) (bfabric.entities.WorkflowTemplateStep attribute) (bfabric.entities.Workunit attribute) ENDPOINT() (bfabric.entities.core.entity.Entity method) Entity (class in bfabric.entities.core.entity) entity_class (bfabric.rest.token_data.TokenData attribute) entity_id (bfabric.rest.token_data.TokenData attribute) EntityReader (class in bfabric.entities.core.entity_reader) EntityUri (class in bfabric.entities.core.uri) EntityUriComponents (class in bfabric.entities.core.uri) environment (bfabric.rest.token_data.TokenData attribute) errors (bfabric.results.result_container.ResultContainer property) executable (bfabric.entities.Application attribute) (bfabric.entities.ExternalJob attribute) Executable (class in bfabric.entities) execution (bfabric.experimental.workunit_definition.WorkunitDefinition attribute) exists() (bfabric.Bfabric method), [1] extend() (bfabric.results.result_container.ResultContainer method) external_jobs (bfabric.entities.Workunit attribute) ExternalJob (class in bfabric.entities) F filename (bfabric.entities.Resource property) find_by_login() (bfabric.entities.User class method) for_client() (bfabric.entities.core.entity_reader.EntityReader class method) from_components() (bfabric.entities.core.uri.EntityUri class method) from_config() (bfabric.Bfabric class method), [1] from_ref() (bfabric.experimental.workunit_definition.WorkunitDefinition class method) from_token_data() (bfabric.Bfabric class method), [1] from_uris() (bfabric.entities.core.uri.GroupedUris class method) from_workunit() (bfabric.experimental.workunit_definition.WorkunitDefinition class method) (bfabric.experimental.workunit_definition.WorkunitExecutionDefinition class method) (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition class method) from_yaml() (bfabric.experimental.workunit_definition.WorkunitDefinition class method) G get() (bfabric.entities.core.entity.Entity method) get_csv() (bfabric.entities.Dataset method) get_first_n_results() (bfabric.results.result_container.ResultContainer method) get_parquet() (bfabric.entities.Dataset method) GroupedUris (class in bfabric.entities.core.uri) GroupedUris.GroupKey (class in bfabric.entities.core.uri) I id (bfabric.entities.core.entity.Entity property) ids (bfabric.entities.MultiplexKit property) input_dataset (bfabric.entities.Workunit attribute) input_resources (bfabric.entities.Workunit attribute) Instrument (class in bfabric.entities) is_success (bfabric.results.result_container.ResultContainer property) items() (bfabric.entities.core.uri.GroupedUris method) J job_id (bfabric.rest.token_data.TokenData attribute) K key (bfabric.entities.Parameter property) L load_entity() (bfabric.rest.token_data.TokenData method) load_yaml() (bfabric.entities.core.entity.Entity class method) M model_config (bfabric.entities.core.uri.EntityUriComponents attribute) (bfabric.entities.core.uri.GroupedUris attribute) (bfabric.entities.core.uri.GroupedUris.GroupKey attribute) (bfabric.experimental.workunit_definition.WorkunitDefinition attribute) (bfabric.experimental.workunit_definition.WorkunitExecutionDefinition attribute) (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) (bfabric.rest.token_data.TokenData attribute) model_dump() (bfabric.rest.token_data.TokenData method) module bfabric.entities bfabric.entities.cache multiplex_ids (bfabric.entities.MultiplexKit attribute) MultiplexId (class in bfabric.entities) MultiplexKit (class in bfabric.entities) mutually_exclusive_dataset_resources() (bfabric.experimental.workunit_definition.WorkunitExecutionDefinition method) O Order (class in bfabric.entities) P Parameter (class in bfabric.entities) parameter_values (bfabric.entities.Workunit property) parameters (bfabric.entities.Executable attribute) (bfabric.entities.Workunit attribute) Plate (class in bfabric.entities) project (bfabric.entities.Order attribute) Project (class in bfabric.entities) Q query() (bfabric.entities.core.entity_reader.EntityReader method) R raw_parameters (bfabric.experimental.workunit_definition.WorkunitExecutionDefinition attribute) read() (bfabric.Bfabric method), [1] read_id() (bfabric.entities.core.entity_reader.EntityReader method) read_ids() (bfabric.entities.core.entity_reader.EntityReader method) read_uri() (bfabric.entities.core.entity_reader.EntityReader method) read_uris() (bfabric.entities.core.entity_reader.EntityReader method) reader (bfabric.Bfabric attribute) (bfabric.Bfabric property) refs (bfabric.entities.core.entity.Entity property) registration (bfabric.experimental.workunit_definition.WorkunitDefinition attribute) Resource (class in bfabric.entities) resources (bfabric.entities.Workunit attribute) (bfabric.experimental.workunit_definition.WorkunitExecutionDefinition attribute) ResultContainer (class in bfabric.results.result_container) Run (class in bfabric.entities) S sample (bfabric.entities.Resource attribute) Sample (class in bfabric.entities) save() (bfabric.Bfabric method), [1] scp_prefix (bfabric.entities.Storage property) storage (bfabric.entities.Application attribute) (bfabric.entities.Executable attribute) (bfabric.entities.Resource attribute) Storage (class in bfabric.entities) storage_absolute_path (bfabric.entities.Resource property) storage_id (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) storage_output_folder (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) storage_relative_path (bfabric.entities.Resource property) store_output_folder (bfabric.entities.Workunit property) submitter_parameters (bfabric.entities.Workunit property) T technology_folder_name (bfabric.entities.Application property) to_list_dict() (bfabric.results.result_container.ResultContainer method) to_polars() (bfabric.entities.Dataset method) (bfabric.results.result_container.ResultContainer method) to_yaml() (bfabric.experimental.workunit_definition.WorkunitDefinition method) token_expires (bfabric.rest.token_data.TokenData attribute) TokenData (class in bfabric.rest.token_data) total_pages_api (bfabric.results.result_container.ResultContainer property) U upload_resource() (bfabric.Bfabric method), [1] uri (bfabric.entities.core.entity.Entity property) user (bfabric.rest.token_data.TokenData attribute) User (class in bfabric.entities) user_id (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) user_ws_password (bfabric.rest.token_data.TokenData attribute) V value (bfabric.entities.Parameter property) W web_service_user (bfabric.rest.token_data.TokenData attribute) web_url (bfabric.entities.core.entity.Entity property) with_auth() (bfabric.Bfabric method), [1] Workflow (class in bfabric.entities) workflow_steps (bfabric.entities.Workflow attribute) workflow_template (bfabric.entities.Workflow attribute) (bfabric.entities.WorkflowTemplateStep attribute) workflow_template_steps (bfabric.entities.WorkflowTemplate attribute) WorkflowStep (class in bfabric.entities) WorkflowTemplate (class in bfabric.entities) WorkflowTemplateStep (class in bfabric.entities) workunit (bfabric.entities.ExternalJob property) (bfabric.entities.Resource attribute) Workunit (class in bfabric.entities) workunit_id (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) workunit_name (bfabric.experimental.workunit_definition.WorkunitRegistrationDefinition attribute) workunit_parameters (bfabric.entities.Workunit property) WorkunitDefinition (class in bfabric.experimental.workunit_definition) WorkunitExecutionDefinition (class in bfabric.experimental.workunit_definition) WorkunitRegistrationDefinition (class in bfabric.experimental.workunit_definition) write_csv() (bfabric.entities.Dataset method) write_parquet() (bfabric.entities.Dataset method)