smoothScatter pairs

smoothScatter pairs

pairs_smooth(data, legend = FALSE, ...)

Arguments

legend

add legend to plots

...

params usually passed to pairs

dataframe

data matrix or data.frame as normally passed to pairs

See also

also pairs

Other utilities: INTERNAL_FUNCTIONS_BY_FAMILY, get_UniprotID_from_fasta_header(), matrix_to_tibble(), multigroup_volcano(), names_to_matrix(), pairs_w_abline(), panel_cor(), panel_hist(), remove_NA_rows(), table_facade()

Examples

tmp = matrix(rep((1:100),times = 4) + rnorm(100*4,0,3),ncol=4)
pairs_smooth(tmp,main="small data", legend=TRUE)
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter

pairs_smooth(tmp,main="small data", diag.panel=panel_hist)
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter
#> Warning: argument 1 does not name a graphical parameter

pairs_smooth(tmp,log="xy",main="small data", legend=TRUE)
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 2 y values <= 0 omitted from logarithmic plot
#> Warning: argument 1 does not name a graphical parameter
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: argument 1 does not name a graphical parameter
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: argument 1 does not name a graphical parameter
#> Warning: 2 x values <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: 2 x values <= 0 omitted from logarithmic plot
#> Warning: 2 y values <= 0 omitted from logarithmic plot
#> Warning: 2 x values <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: argument 1 does not name a graphical parameter
#> Warning: 2 x values <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: argument 1 does not name a graphical parameter
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 2 y values <= 0 omitted from logarithmic plot
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: argument 1 does not name a graphical parameter
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 2 y values <= 0 omitted from logarithmic plot
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot
#> Warning: 1 x value <= 0 omitted from logarithmic plot
#> Warning: 1 y value <= 0 omitted from logarithmic plot