Write LFQData, or provide outputs for writing.

Write LFQData, or provide outputs for writing.

Write LFQData, or provide outputs for writing.

See also

LFQData

Other LFQData: LFQData, LFQDataAggregator, LFQDataPlotter, LFQDataStats, LFQDataSummariser, LFQDataToSummarizedExperiment()

Public fields

lfq

LFQData

format

format to write to

prefix

prefix of filename

file_paths

list with paths were data was written to.

Methods

Public methods

• LFQDataWriter$new()

• LFQDataWriter$get_long()

• LFQDataWriter$get_wide()

• LFQDataWriter$write_long()

• LFQDataWriter$write_wide()

• LFQDataWriter$clone()

---

Method new()

initialize class

Usage

LFQDataWriter$new(lfqdata, prefix = "ms_", format = "xlsx")

Arguments

lfqdata

LFQData

prefix

prefix files with

format

which format to write to ("xlsx", "csv", "html")

---

Method get_long()

Get data in long format for writing

Usage

LFQDataWriter$get_long()

Returns

tibble gets data formatted for writing

---

Method get_wide()

Get data in Wide format for writing

Usage

LFQDataWriter$get_wide()

Returns

list with data and annotation gets data formatted for writing

---

Method write_long()

write data to file

Usage

LFQDataWriter$write_long(path_qc)

Arguments

path_qc

path to write to

---

Method write_wide()

write data to file

Usage

LFQDataWriter$write_wide(path_qc)

Arguments

path_qc

path to write to

---

Method clone()

The objects of this class are cloneable with this method.

Usage

LFQDataWriter$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.