Effective contaminant regex actually applied by is_contaminant

Effective contaminant regex actually applied by is_contaminant

Usage

effective_contaminant_pattern(pattern = NULL)

Arguments

pattern

optional configured contaminant regex

Value

a single regex string

See also

Other utilities: INTERNAL_FUNCTIONS_BY_FAMILY, effective_decoy_pattern(), get_uniprot_id_from_fasta_header(), is_contaminant(), is_decoy(), matrix_to_tibble(), multigroup_volcano(), names_to_matrix(), pairs_smooth(), panel_cor(), remove_na_rows(), table_facade()

Examples

effective_contaminant_pattern()
#> [1] "^zz|^CON__|^CON_|^Cont_|^contam_"