Skip to contents

Complete cases

Source: R/tidyMS_data_setup.R
complete_cases.Rd

The tidy table does not need to contain missing data. This function re-establishes the missing observations in a sample.

Usage

complete_cases(lfqdata)

Arguments

lfqdata

LFQData object

See also

Other configuration: AnalysisConfiguration, INTERNAL_FUNCTIONS_BY_FAMILY, R6_extract_values(), make_interaction_column(), make_reduced_hierarchy_config(), sample_subset(), separate_hierarchy(), setup_analysis(), table_factors(), table_factors_size()

Examples


bb <- sim_lfq_data_protein_config()
#> creating sampleName from file_name column
#> completing cases
#> completing cases done
#> setup done
lfq <- LFQData$new(bb$data, bb$config)
xx <- complete_cases(lfq)
#> completing cases
stopifnot(nrow(bb$data) <= nrow(xx))