R/AnalysisConfiguration.R
spread_response_by_IsotopeLabel.RdSpreads isotope label heavy and light into two columns
spread_response_by_IsotopeLabel(resData, config)Other configuration:
AnalysisConfiguration,
AnalysisParameters,
AnalysisTableAnnotation,
INTERNAL_FUNCTIONS_BY_FAMILY,
R6_extract_values(),
complete_cases(),
concrete_AnalysisConfiguration,
make_interaction_column(),
make_reduced_hierarchy_config(),
sample_subset(),
separate_factors(),
separate_hierarchy(),
setup_analysis(),
table_factors()
bb <- prolfqua::sim_lfq_data_peptide_config()
#> creating sampleName from fileName column
#> Warning: no nr_children column specified in the data, adding column nr_children and setting to 1.
#> completing cases
configur <- bb$config$clone(deep=TRUE)
data <- bb$data
x<-spread_response_by_IsotopeLabel(data,configur)
bb <- prolfqua_data('data_skylineSRM_HL_A')
configur <- bb$config_f()
data <- bb$analysis(bb$data, configur)
#> creating sampleName from fileName column
#> Warning: no nr_children column specified in the data, adding column nr_children and setting to 1.
#> completing cases
bb <- prolfqua_data('data_skylineSRM_HL_A')
conf <- bb$config_f()
analysis <- bb$analysis(bb$data, bb$config_f())
#> creating sampleName from fileName column
#> Warning: no nr_children column specified in the data, adding column nr_children and setting to 1.
#> completing cases
x <- spread_response_by_IsotopeLabel(analysis, conf)