prolfqua 1.3.6
  • Reference
  • Articles
    • Comparing Two Groups with prolfqua
    • Getting Started, Data Import, Creating prolfqua Configurations
    • Modelling dataset with two Factors
    • Quality Control & Sample Size Estimation
    • QC and Sample Size Estimation
    • Simulate Peptide level Data
    • Impute

Add protein estimate to plot of peptide intensities

Source: R/tidyMS_aggregation.R
plot_hierarchies_add_quantline.Rd

Add protein estimate to plot of peptide intensities

plot_hierarchies_add_quantline(p, data, aes_y, configuration)

See also

Other aggregation: INTERNAL_FUNCTIONS_BY_FAMILY, aggregate_intensity_topN(), estimate_intensity(), intensity_summary_by_hkeys(), medpolish_estimate(), medpolish_estimate_df(), medpolish_estimate_dfconfig(), medpolish_protein_estimates(), plot_estimate(), plot_hierarchies_line(), plot_hierarchies_line_df(), rlm_estimate(), rlm_estimate_dfconfig()

Other plotting: ContrastsPlotter, INTERNAL_FUNCTIONS_BY_FAMILY, UpSet_interaction_missing_stats(), UpSet_missing_stats(), medpolish_estimate_df(), missigness_histogram(), missingness_per_condition(), missingness_per_condition_cumsum(), plot_NA_heatmap(), plot_estimate(), plot_heatmap(), plot_heatmap_cor(), plot_heatmap_cor_iheatmap(), plot_hierarchies_boxplot_df(), plot_hierarchies_line(), plot_hierarchies_line_df(), plot_intensity_distribution_violin(), plot_pca(), plot_raster(), plot_sample_correlation(), plot_screeplot()

Examples

#todo

Contents

Developed by Witold Wolski.

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